Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (278 aa)    
Predicted Functional Partners:
ADO47157.1
KEGG: cko:CKO_04219 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
 
 
 0.992
ADO49343.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: enc:ECL_04168 hypothetical protein.
 
  
  0.968
ADO47446.1
KEGG: ent:Ent638_3055 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; Belongs to the peptidase S26 family.
   
  
 0.898
ADO49787.1
PFAM: YaeQ family protein; KEGG: kpe:KPK_4530 hypothetical protein.
   
    0.891
uxaC
KEGG: ctu:Ctu_04620 glucuronate isomerase; PFAM: Glucuronate isomerase.
 
   
 0.851
parC
DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
    0.830
ADO49217.1
PFAM: regulatory protein TetR; KEGG: kpe:KPK_3687 transcriptional regulator, TetR family.
   
    0.828
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.802
ADO49922.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kva:Kvar_4344 short-chain dehydrogenase/reductase SDR.
 
  
 0.786
ADO47040.1
PFAM: glycosyl hydrolase family 88; KEGG: enc:ECL_04348 glycosyl hydrolase family protein.
 
   
 0.785
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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