STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47176.1KEGG: kpe:KPK_0880 hypothetical protein. (155 aa)    
Predicted Functional Partners:
ADO47177.1
KEGG: kpe:KPK_0881 hypothetical protein.
 
 
 0.957
ADO47178.1
PFAM: Protein of unknown function DUF2509; KEGG: kva:Kvar_0837 protein of unknown function DUF2509.
     
 0.872
ADO47179.1
KEGG: ent:Ent638_3266 hypothetical protein.
     
 0.870
rcsF
Outer membrane lipoprotein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.773
rssB
Response regulator receiver protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.
  
 
   0.770
ADO49845.1
KEGG: enc:ECL_00927 hypothetical protein.
  
     0.770
ADO47322.1
PFAM: Protein of unknown function DUF2002; KEGG: kva:Kvar_1068 protein of unknown function DUF2002.
  
     0.764
ADO49086.1
Regulator of competence-specific genes; PFAM: TfoX domain-containing protein; KEGG: enc:ECL_02687 hypothetical protein.
  
     0.764
ADO46371.1
PFAM: protein of unknown function DUF1454; KEGG: kva:Kvar_0097 protein of unknown function DUF1454.
  
     0.763
ADO47117.1
yecA family protein; KEGG: sfv:SFV_2957 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); Belongs to the UPF0149 family.
  
     0.761
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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