STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47177.1KEGG: kpe:KPK_0881 hypothetical protein. (185 aa)    
Predicted Functional Partners:
ADO47176.1
KEGG: kpe:KPK_0880 hypothetical protein.
 
 
 0.931
ADO47179.1
KEGG: ent:Ent638_3266 hypothetical protein.
     
 0.842
ADO47178.1
PFAM: Protein of unknown function DUF2509; KEGG: kva:Kvar_0837 protein of unknown function DUF2509.
  
  
 0.837
ADO49177.1
KEGG: enc:ECL_02791 general secretion pathway protein K.
  
 
 0.828
ADO46555.1
PFAM: Protein of unknown function DUF2500; KEGG: kva:Kvar_0268 protein of unknown function DUF2500.
  
     0.771
recC
Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]
       0.729
tsgA
PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_04740 putative MFS transporter.
  
     0.676
ADO48577.1
PFAM: protein of unknown function DUF1283; KEGG: ses:SARI_01439 hypothetical protein; Belongs to the UPF0482 family.
  
     0.590
ADO47459.1
KEGG: enc:ECL_03892 hypothetical protein.
  
     0.563
ADO49850.1
KEGG: kva:Kvar_4259 hypothetical protein.
  
     0.563
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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