STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47195.1TIGRFAM: serine transporter; KEGG: enc:ECL_04129 serine transporter. (431 aa)    
Predicted Functional Partners:
ADO47194.1
TIGRFAM: L-serine dehydratase 1; KEGG: ent:Ent638_3250 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
  
 0.805
dps
Ferritin Dps family protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.
    
   0.724
ADO47071.1
PFAM: protein of unknown function DUF469; KEGG: sdy:SDY_3113 hypothetical protein.
  
     0.475
xni
5'-3' exonuclease, SAM-fold domain protein; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.
       0.469
ADO48144.1
Aromatic amino acid transporter; KEGG: kpu:KP1_3537 tyrosine-specific transport protein; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease.
  
     0.423
ADO48581.1
PFAM: protein of unknown function DUF1161; KEGG: ent:Ent638_1926 hypothetical protein.
  
     0.421
ADO48641.1
Aromatic amino acid transporter; KEGG: ect:ECIAI39_4313 tryptophan permease TnaB; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease.
  
   
 0.420
ADO46813.1
Aromatic amino acid transporter; KEGG: mtr; tryptophan-specific transport protein; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease.
  
   
 0.413
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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