Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO47232.1Helix-turn-helix domain protein; KEGG: pam:PANA_3040 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (153 aa)    
Predicted Functional Partners:
ADO47058.1
Citrate carrier protein; Uptake of citrate across the boundary membrane with the concomitant uptake of a sodium ion (symport system). Belongs to the sodium:citrate (SCF) symporter family.
  
     0.588
ADO47387.1
Hypothetical protein; KEGG: ecv:APECO1_1179 phage related tail protein.
  
     0.547
ADO50074.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
  
     0.547
ADO46964.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
  
     0.545
ADO48565.1
KEGG: etr:ETAE_0786 glutamate decarboxylase and related PLP-dependent protein.
  
     0.519
ADO47520.1
KEGG: cko:CKO_00281 hypothetical protein.
  
     0.494
ADO49785.1
KEGG: kva:Kvar_4175 copper resistance lipoprotein NlpE.
  
    0.478
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.465
ADO48492.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: efe:EFER_1431 short chain dehydrogenase.
  
     0.456
ADO47365.1
KEGG: seg:SG0292 hypothetical protein.
  
     0.455
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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