STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47237.1PFAM: Radical SAM domain protein; KEGG: ebi:EbC_21260 radical SAM domain protein. (420 aa)    
Predicted Functional Partners:
ADO47238.1
PFAM: sulfatase; KEGG: met:M446_6751 sulfatase.
 
  
 0.850
ADO46297.1
PFAM: sulfatase; KEGG: cko:CKO_00025 hypothetical protein.
 
  
 0.474
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
 
     0.464
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
  
     0.447
ADO49693.1
KEGG: vha:VIBHAR_05112 hypothetical protein.
  
     0.443
ADO49477.1
PFAM: surface antigen (D15); KEGG: spe:Spro_2510 putative outer membrane protein.
  
     0.440
ADO47036.1
KEGG: eok:G2583_4322 inner membrane protein YiaW.
  
     0.420
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
  
     0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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