STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47239.1PFAM: acyltransferase 3; KEGG: swi:Swit_4615 acyltransferase 3. (336 aa)    
Predicted Functional Partners:
ADO47240.1
KEGG: bav:BAV2626 cellulose biosynthesis protein.
     
 0.781
ADO46955.1
KEGG: ana:alr0499 type I site-specific deoxyribonuclease; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
   
    0.505
ADO47238.1
PFAM: sulfatase; KEGG: met:M446_6751 sulfatase.
       0.432
ADO48904.1
PFAM: acyltransferase 3; KEGG: btk:BT9727_2535 acyltransferase family protein.
  
     0.421
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.