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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47246.1KEGG: enc:ECL_04076 hypothetical protein. (114 aa)    
Predicted Functional Partners:
ADO47042.1
PFAM: protein of unknown function DUF1971; KEGG: kpu:KP1_3657 putative tellurite resistance protein.
  
   
 0.555
ADO47245.1
PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: kpu:KP1_4319 hypothetical protein.
       0.522
ADO48145.1
KEGG: kpu:KP1_3536 hypothetical protein; TIGRFAM: Protein of unknown function DUF2492; PFAM: Protein of unknown function DUF2492.
  
     0.499
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.493
ADO49567.1
PFAM: protein of unknown function DUF454; KEGG: ent:Ent638_0948 hypothetical protein.
 
     0.431
hmp
Globin; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
   
  
 0.410
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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