STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ADO47258.1PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: kva:Kvar_1008 NADH dehydrogenase (ubiquinone) 30 kDa subunit. (569 aa)    
Predicted Functional Partners:
ADO47256.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cko:CKO_04078 formate hydrogenlyase subunit 3.
 
 
 0.999
ADO47257.1
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: stm:STM2850 hydrogenase 3 membrane subunit.
 
 
 0.999
ADO47260.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: kpu:KP1_4322 hydrogenase 3 small subunit.
 
 0.999
ADO47259.1
KEGG: ses:SARI_00124 formate hydrogenlyase complex iron-sulfur subunit.
 
 
 0.996
ADO50320.1
Manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: kpe:KPK_5187 formate dehydrogenase H, alpha subunit, selenocysteine-containing; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.995
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 0.990
ADO47255.1
KEGG: enc:ECL_04063 formate hydrogenlyase subunit 2.
 
 
 0.985
ADO47261.1
PFAM: formate hydrogenlyase maturation HycH; KEGG: cko:CKO_04073 hypothetical protein.
 
  
 0.973
ADO47262.1
KEGG: sec:SC2778 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
 
  
 0.973
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 
 0.970
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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