STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47270.1PFAM: LmbE family protein; KEGG: ecr:ECIAI1_0363 hypothetical protein. (215 aa)    
Predicted Functional Partners:
ADO47271.1
KEGG: ebw:BWG_0250 putative glucosyltransferase; manually curated; PFAM: glycosyl transferase family 2.
 
  
 0.848
ADO47272.1
Putative transferase; Manually curated; KEGG: ecz:ECS88_0359 putative transferase.
  
  
 0.811
ADO47273.1
KEGG: ecp:ECP_2001 hypothetical protein.
       0.773
ADO47274.1
Transcriptional regulator, AraC family; KEGG: seh:SeHA_C3064 transcriptional regulator HilD; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
       0.541
birA
Bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
  
  
 0.497
ADO47275.1
PFAM: Lytic transglycosylase catalytic; KEGG: kpn:KPN_pKPN4p07123 putative lytic transglycosylase.
       0.457
ADO48890.1
PFAM: Mig-14 family protein; KEGG: esa:ESA_pESA3p05439 hypothetical protein.
  
  
 0.422
cysS
TIGRFAM: cysteinyl-tRNA synthetase; KEGG: kva:Kvar_3899 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.420
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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