STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47285.1KEGG: fgr:FG10658.1 hypothetical protein. (360 aa)    
Predicted Functional Partners:
ADO47286.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.773
ADO47279.1
KEGG: cro:ROD_46491 putative type IV pilus biogenesis protein.
       0.737
ADO47280.1
Hypothetical protein; KEGG: cro:ROD_46501 putative type IV pilus biogenesis protein.
       0.737
ADO47281.1
Hypothetical protein; KEGG: cro:ROD_46511 putative type IV pilus biogenesis protein.
       0.737
ADO47282.1
Hypothetical protein; KEGG: cro:ROD_46521 putative type IV pilus biogenesis protein.
       0.737
ADO47283.1
PFAM: type II secretion system protein E; KEGG: cro:ROD_46531 putative type IV pilus biogenesis protein CfcH.
       0.737
ADO47284.1
Type II secretion system F domain protein; KEGG: cro:ROD_46541 putative type IV pilus biogenesis protein; manually curated; PFAM: Type II secretion system F domain.
       0.737
ADO47278.1
KEGG: cro:ROD_46481 putative type IV pilus biogenesis protein.
       0.685
ADO47277.1
Hypothetical protein; KEGG: cro:ROD_46471 putative type IV pilus biogenesis protein.
       0.645
ADO47276.1
PFAM: Toxin-coregulated pilus subunit TcpA; KEGG: cro:ROD_46461 putative type IV pilin.
       0.490
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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