STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47298.1TIGRFAM: lytic murein transglycosylase B; KEGG: kva:Kvar_1035 lytic murein transglycosylase B. (358 aa)    
Predicted Functional Partners:
ADO47176.1
KEGG: kpe:KPK_0880 hypothetical protein.
  
     0.710
ADO47322.1
PFAM: Protein of unknown function DUF2002; KEGG: kva:Kvar_1068 protein of unknown function DUF2002.
  
     0.571
ADO47117.1
yecA family protein; KEGG: sfv:SFV_2957 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); Belongs to the UPF0149 family.
  
     0.566
ADO47503.1
PFAM: Protein of unknown function DUF2133; KEGG: kva:Kvar_1215 protein of unknown function DUF2133.
  
     0.562
ADO49861.1
KEGG: sdy:SDY_0138 putative major pilin subunit.
 
     0.547
rcsF
Outer membrane lipoprotein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.541
ADO49845.1
KEGG: enc:ECL_00927 hypothetical protein.
  
     0.521
ADO47295.1
PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: kpu:KP1_4303 PTS system glucitol/sorbitol-specific transporter subunit IIA.
     
 0.516
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.491
ADO48214.1
PFAM: Mammalian cell entry related domain protein; KEGG: cko:CKO_01139 hypothetical protein.
 
     0.491
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.