STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47315.1TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: cro:ROD_31311 glycine betaine/L-proline ABC transporter, ATP-binding protein; SMART: AAA ATPase. (400 aa)    
Predicted Functional Partners:
ADO47313.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cko:CKO_04029 glycine betaine transporter periplasmic subunit.
 
 0.999
ADO47314.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_2823 glycine betaine transporter membrane protein.
 0.999
ADO47835.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_03438 putative glycine/betaine/choline ABC transporter permease component.
  
 0.713
ADO47833.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2729 binding-protein-dependent transport systems inner membrane component.
  
 0.709
ADO49150.1
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: cko:CKO_02185 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase.
 
     
0.572
ADO47317.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.460
nikD
Nickel import ATP-binding protein NikD; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
 
     
0.438
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.