Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO47393.1Tail Collar domain protein; KEGG: cro:ROD_09041 putative phage tail fibre protein; manually curated; PFAM: Tail Collar domain protein. (141 aa)    
Predicted Functional Partners:
ADO47394.1
PFAM: tail assembly chaperone gp38; KEGG: ent:Ent638_3483 phage tail assembly chaperone GP38.
 
  
 0.959
ADO47396.1
Hypothetical protein; KEGG: pam:PANA_3406 H.
 
     0.953
ADO47391.1
KEGG: ecq:ECED1_2439 major tail sheath protein (protein fi).
 
  
 0.768
ADO47390.1
KEGG: ecm:EcSMS35_4346 phage major tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein.
 
    0.712
ADO47385.1
KEGG: kpn:KPN_04858 putative prophage tail protein.
 
  
 0.642
ADO50263.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: kva:Kvar_4479 polypeptide-transport-associated domain protein ShlB-type.
  
     0.625
ADO47386.1
PFAM: P2 GpU family protein; KEGG: ecg:E2348C_2891 predicted tail fiber protein.
 
    0.609
ADO47392.1
PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ecg:E2348C_2886 predicted DNA-invertase.
     
 0.592
ADO47406.1
PFAM: tail X family protein; KEGG: kpn:KPN_04877 putative prophage tail component protein.
 
    0.588
ADO47400.1
KEGG: ecv:APECO1_4478 phage baseplate protein; manually curated; TIGRFAM: phage baseplate assembly protein V.
 
    0.578
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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