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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47396.1Hypothetical protein; KEGG: pam:PANA_3406 H. (338 aa)    
Predicted Functional Partners:
ADO47397.1
TIGRFAM: phage tail protein I; KEGG: ent:Ent638_3485 phage tail protein I.
 
  
 0.958
ADO47398.1
PFAM: Baseplate J family protein; KEGG: ent:Ent638_3486 baseplate J family protein.
 
    0.956
ADO47400.1
KEGG: ecv:APECO1_4478 phage baseplate protein; manually curated; TIGRFAM: phage baseplate assembly protein V.
 
    0.955
ADO47393.1
Tail Collar domain protein; KEGG: cro:ROD_09041 putative phage tail fibre protein; manually curated; PFAM: Tail Collar domain protein.
 
     0.953
ADO47399.1
PFAM: GPW/gp25 family protein; KEGG: ecz:ECS88_2199 baseplate assembly protein W (gpW).
 
    0.953
ADO47401.1
KEGG: etw:ECSP_2856 P2 phage tail completion protein R, GpR.
 
     0.882
ADO47406.1
PFAM: tail X family protein; KEGG: kpn:KPN_04877 putative prophage tail component protein.
 
    0.873
ADO47395.1
KEGG: ypy:YPK_3110 tail assembly chaperone GP38; manually curated; PFAM: tail assembly chaperone gp38.
  
  
 0.831
ADO47385.1
KEGG: kpn:KPN_04858 putative prophage tail protein.
 
  
 0.799
ADO47391.1
KEGG: ecq:ECED1_2439 major tail sheath protein (protein fi).
 
  
 0.797
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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