Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO47430.1PFAM: DTW domain containing protein; KEGG: cro:ROD_25281 hypothetical protein. (249 aa)    
Predicted Functional Partners:
ADO47431.1
Thioredoxin; KEGG: enc:ECL_03918 thioredoxin 2; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein.
       0.727
ADO47429.1
PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: kpu:KP1_4164 putative NAD(P)-binding and ATP-binding acyl-CoA synthetase.
       0.688
ADO47432.1
PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: enc:ECL_03917 putative methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.496
ADO47427.1
KEGG: kpu:KP1_4166 hypothetical protein.
 
     0.467
glpG
Rhomboid protease; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
 
     0.440
ADO47428.1
KEGG: kva:Kvar_1155 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase.
       0.435
ADO49376.1
KEGG: cko:CKO_02474 LexA regulated protein.
  
     0.418
ADO47433.1
PFAM: transposase IS4 family protein; KEGG: pct:PC1_1038 transposase IS4 family protein.
 
     0.410
ADO47199.1
PFAM: protein of unknown function DUF446; KEGG: kpu:KP1_4407 hypothetical protein.
  
     0.408
ADO47827.1
PFAM: protein of unknown function DUF1282; KEGG: kva:Kvar_1492 protein of unknown function DUF1282.
  
     0.405
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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