STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47477.1TIGRFAM: sugar transporter; KEGG: kpu:KP1_4124 putative general substrate transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (478 aa)    
Predicted Functional Partners:
ADO47478.1
PFAM: Aldose 1-epimerase; KEGG: cko:CKO_00241 hypothetical protein.
       0.805
ADO47476.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: kpu:KP1_4125 putative transferase.
 
     0.744
ADO47479.1
PFAM: major facilitator superfamily MFS_1; KEGG: cro:ROD_24881 putative 3-phenylpropionate permease.
       0.613
ADO47532.1
KEGG: enc:ECL_03800 5-deoxy-glucuronate isomerase.
   
  
 0.499
ADO47475.1
PFAM: ROK family protein; KEGG: kpn:KPN_02874 putative NAGC-like transcriptional regulator.
       0.457
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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