Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO47516.1PFAM: protein of unknown function DUF1407; KEGG: cko:CKO_00277 hypothetical protein. (71 aa)    
Predicted Functional Partners:
ADO48437.1
PFAM: Fusaric acid resistance protein conserved region; KEGG: kpn:KPN_01984 hypothetical protein.
  
     0.724
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.708
ADO48459.1
PFAM: Haemolysin expression modulating family protein; KEGG: ctu:Ctu_20090 OriC-binding nucleoid-associated protein.
  
     0.676
ADO50196.1
PFAM: Opacity-associated protein A domain protein; KEGG: kpu:KP1_0473 putative cell envelope opacity-associated protein A.
  
     0.658
ADO47515.1
PFAM: oxidoreductase domain protein; KEGG: kpu:KP1_4090 hypothetical protein.
       0.651
ADO46749.1
PFAM: protein of unknown function DUF1471; KEGG: ent:Ent638_3673 hypothetical protein.
  
     0.643
ADO48766.1
PFAM: Protein of unknown function DUF2498; KEGG: kva:Kvar_3045 protein of unknown function DUF2498.
  
     0.639
ADO46748.1
PFAM: protein of unknown function DUF1471; KEGG: kva:Kvar_0452 protein of unknown function DUF1471.
  
     0.635
ADO49254.1
PFAM: sulfatase; KEGG: enc:ECL_02915 sulfatase.
  
     0.617
ADO50353.1
KEGG: enc:ECL_00308 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G.
  
     0.592
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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