STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47528.1PFAM: inner-membrane translocator; KEGG: enc:ECL_03804 ribose transport system permease protein. (342 aa)    
Predicted Functional Partners:
ADO47526.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_03806 ribose transport system substrate-binding protein.
 0.992
ADO47527.1
ABC transporter related protein; KEGG: enc:ECL_03805 ribose transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.991
ADO50631.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_4050 D-ribose transporter subunit RbsB.
 
 0.847
rbsA-3
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.846
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.840
ADO49629.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cro:ROD_28431 putative ABC transporter periplasmic binding protein.
 
 0.836
ADO50407.1
Manually curated; PFAM: ABC transporter related; KEGG: pst:PSPTO_2368 ribose ABC transporter, ATP-binding protein; SMART: AAA ATPase.
 
 0.835
araG
ABC transporter related protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.830
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.821
ADO47473.1
KEGG: cro:ROD_24821 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.816
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.