STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47530.1PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: enc:ECL_03802 5-dehydro-2-deoxygluconokinase. (634 aa)    
Predicted Functional Partners:
ADO47532.1
KEGG: enc:ECL_03800 5-deoxy-glucuronate isomerase.
 
 
 0.999
ADO47531.1
Myo-inosose-2 dehydratase; KEGG: cko:CKO_03985 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel.
  
 0.983
ADO47529.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cko:CKO_03987 hypothetical protein.
  
 0.973
ADO47524.1
PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: eic:NT01EI_2136 putative malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
 
  
 0.960
ADO47525.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cko:CKO_03991 hypothetical protein.
 
  
 0.913
ADO47522.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: enc:ECL_03810 RpiR family transcriptional regulator.
 
     0.831
ADO47527.1
ABC transporter related protein; KEGG: enc:ECL_03805 ribose transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.799
ADO47528.1
PFAM: inner-membrane translocator; KEGG: enc:ECL_03804 ribose transport system permease protein.
  
  
 0.774
ADO47526.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_03806 ribose transport system substrate-binding protein.
  
  
 0.636
ADO47523.1
KEGG: enc:ECL_03809 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase.
 
  
 0.596
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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