STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47551.1Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein; KEGG: spq:SPAB_00455 hypothetical protein. (392 aa)    
Predicted Functional Partners:
ADO47552.1
PFAM: Citrate transporter; KEGG: seg:SG2523 putative permease.
 
   
 0.865
ADO47553.1
TIGRFAM: glycerate kinase; KEGG: stt:t0367 hypothetical protein; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.813
ADO49745.1
TIGRFAM: glycerate kinase; KEGG: glycerate kinase GclK; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.536
ADO47550.1
PFAM: protein of unknown function UPF0118; KEGG: enc:ECL_03779 hypothetical protein.
       0.499
ADO49013.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.411
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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