STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47588.1Cell wall hydrolase/autolysin; KEGG: kva:Kvar_1277 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin. (289 aa)    
Predicted Functional Partners:
ADO50226.1
Cell wall hydrolase/autolysin; KEGG: cko:CKO_03666 N-acetylmuramoyl-L-alanine amidase II; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
  
 
0.915
ADO47185.1
KEGG: cko:CKO_04182 hypothetical protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
  
 
0.910
hemF
Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
      0.873
ADO49579.1
PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_0936 GCN5-related N-acetyltransferase.
 
      0.546
glpG
Rhomboid protease; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
  
   0.531
ADO47299.1
PFAM: CinA domain protein; KEGG: ssn:SSON_2844 competence damage-inducible protein A; Belongs to the CinA family.
 
     0.494
ADO47589.1
PFAM: GCN5-related N-acetyltransferase; KEGG: kpu:KP1_4026 putative acetyltransferase; Belongs to the acetyltransferase family. YpeA subfamily.
       0.488
ADO47590.1
KEGG: kpu:KP1_4024 hypothetical protein.
       0.488
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.487
ADO47230.1
Peptidase M23; Manually curated; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; KEGG: kpu:KP1_4374 lipoprotein NlpD; SMART: Peptidoglycan-binding LysM.
 
   
 0.456
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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