Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO47615.1PFAM: protein of unknown function DUF1323; KEGG: kva:Kvar_1304 protein of unknown function DUF1323. (118 aa)    
Predicted Functional Partners:
ADO47614.1
PFAM: protein of unknown function DUF1323; KEGG: kpu:KP1_4000 putative negative regulator.
  
   
0.846
ADO48131.1
KEGG: enc:ECL_01710 GP16; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure.
   
  
 0.729
ADO49503.1
PFAM: Fels-1 Propage domain protein; KEGG: bpl:BURPS1106A_1585 putative prophage protein.
   
    0.486
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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