Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ADO47624.1KEGG: ent:Ent638_2919 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein. (565 aa)    
Predicted Functional Partners:
ADO47623.1
Two component transcriptional regulator, LytTR family; KEGG: cko:CKO_00419 hypothetical protein; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
 
 0.998
ADO47839.1
Two component transcriptional regulator, LytTR family; KEGG: kpu:KP1_3786 putative two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
 
 
 0.897
ADO46475.1
Oxalate/Formate Antiporter; KEGG: cko:CKO_04997 hypothetical protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1.
 
   
 0.575
ADO48995.1
KEGG: kva:Kvar_3324 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; Belongs to the PHP family.
  
     0.412
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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