Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO47638.1PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_2817 major facilitator transporter. (445 aa)    
Predicted Functional Partners:
ADO47637.1
PFAM: protein of unknown function DUF849; KEGG: ppg:PputGB1_2818 hypothetical protein.
 
    0.849
ADO47636.1
KEGG: ppg:PputGB1_2819 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
 
     0.659
ADO49919.1
PFAM: major facilitator superfamily MFS_1; KEGG: kva:Kvar_4341 major facilitator superfamily MFS_1.
  
     0.590
ADO47639.1
TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: avn:Avin_17570 3-oxoacid CoA-transferase, subunit A; PFAM: coenzyme A transferase.
       0.578
ADO47640.1
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: psa:PST_3219 CoA transferase, subunit B; PFAM: coenzyme A transferase.
       0.578
ADO47635.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_A2148 zinc-containing alcohol dehydrogenase superfamily protein.
 
    0.547
ADO47633.1
PFAM: protein of unknown function DUF1234; KEGG: ppf:Pput_2670 hypothetical protein.
 
     0.451
ADO46466.1
PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_5260 general substrate transporter.
  
     0.421
ADO47632.1
KEGG: ppg:PputGB1_2814 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.416
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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