STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepAPeptidase U6 penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. Belongs to the peptidase M74 family. (274 aa)    
Predicted Functional Partners:
ADO47659.1
PFAM: protein of unknown function DUF81; KEGG: kpu:KP1_3967 hypothetical protein.
 
    0.948
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
  
 0.827
ADO47660.1
PFAM: protein of unknown function DUF462; KEGG: kva:Kvar_1333 protein of unknown function DUF462.
       0.805
ADO47661.1
PFAM: YfcL protein; KEGG: esa:ESA_00891 hypothetical protein.
       0.795
ADO49107.1
PFAM: protein of unknown function DUF882; KEGG: esa:ESA_02416 hypothetical protein.
  
   
 0.749
prmB
protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
       0.740
ADO48736.1
PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eok:G2583_1668 hypothetical protein.
  
     0.641
ADO48735.1
PFAM: Uncharacterised protein family UPF0283; KEGG: enc:ECL_01793 hypothetical protein.
  
     0.585
ADO49967.1
PFAM: CreA family protein; KEGG: cko:CKO_03389 hypothetical protein.
  
     0.547
ADO50445.1
Lysophospholipase; KEGG: cko:CKO_00166 lysophospholipase L2; PFAM: alpha/beta hydrolase fold.
  
     0.537
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.