Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO47696.1PFAM: YfbU family protein; KEGG: kpu:KP1_3931 hypothetical protein; Belongs to the UPF0304 family. (164 aa)    
Predicted Functional Partners:
ADO47697.1
KEGG: kpu:KP1_3930 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
 
    0.821
ADO47695.1
PFAM: protein of unknown function DUF412; KEGG: set:SEN2318 hypothetical protein.
 
  
 0.806
ADO49364.1
PFAM: Protein of unknown function DUF2517; KEGG: ent:Ent638_1211 putative periplasmic protein.
  
     0.768
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.761
ADO50510.1
PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein.
  
     0.757
ADO49724.1
KEGG: enc:ECL_01069 fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.739
wzzE
Lipopolysaccharide biosynthesis protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.726
ADO48766.1
PFAM: Protein of unknown function DUF2498; KEGG: kva:Kvar_3045 protein of unknown function DUF2498.
  
     0.703
ADO46660.1
PFAM: YheO-like domain-containing protein; KEGG: cro:ROD_44731 putative DNA binding protein.
  
     0.682
ADO47816.1
PFAM: protein of unknown function DUF1097; KEGG: sdy:SDY_1001 hypothetical protein.
  
     0.678
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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