STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhmDMandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR). (401 aa)    
Predicted Functional Partners:
rhmA
4-hydroxy-2-oxovalerate aldolase; Catalyzes the reversible retro-aldol cleavage of 2-keto-3- deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde. Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily.
 
 
 0.971
ADO47733.1
Transcriptional regulator, IclR family; KEGG: set:SEN2274 putative transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
 
   
 0.824
ADO47735.1
PFAM: major facilitator superfamily MFS_1; KEGG: seh:SeHA_C2530 major facilitator family transporter.
 
  
 0.790
ADO46286.1
2-dehydro-3-deoxygalactonokinase; KEGG: enc:ECL_00009 2-keto-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase.
 
  
 0.486
ADO50581.1
PFAM: dihydrodipicolinate synthetase; KEGG: cro:ROD_38421 putative lyase; Belongs to the DapA family.
 
   
 0.486
ADO49242.1
PFAM: protein of unknown function DUF1479; KEGG: eum:ECUMN_1009 hypothetical protein.
  
     0.463
ADO47732.1
Competence/damage-inducible protein CinA; KEGG: see:SNSL254_A2478 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain.
       0.428
ADO48812.1
KEGG: ebi:EbC_37040 beta-lactamase-like protein.
  
     0.405
dlgD
Malate/L-lactate dehydrogenase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
     0.400
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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