STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47795.1KEGG: ent:Ent638_2764 sugar efflux transporter; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1. (393 aa)    
Predicted Functional Partners:
ADO48494.1
PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_2535 hypothetical protein.
  
     0.555
ADO47167.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_0828 protein of unknown function DUF903.
  
     0.489
ADO48616.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_2398 protein of unknown function DUF903.
  
     0.487
tsgA
PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_04740 putative MFS transporter.
  
     0.459
ADO48784.1
PFAM: protein of unknown function UPF0259; KEGG: enc:ECL_01650 hypothetical protein.
  
     0.457
ADO48459.1
PFAM: Haemolysin expression modulating family protein; KEGG: ctu:Ctu_20090 OriC-binding nucleoid-associated protein.
  
     0.442
lpoB
Membrane lipoprotein lipid attachment site; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
  
     0.441
ADO48685.1
PFAM: porin Gram-negative type; KEGG: sew:SeSA_A1572 outer membrane protein N.
  
     0.436
ADO49616.1
PFAM: Uncharacterized lipoprotein; KEGG: kpu:KP1_1264 hypothetical protein.
  
     0.436
ADO50025.1
PFAM: major facilitator superfamily MFS_1; KEGG: etr:ETAE_2780 hypothetical protein.
  
     0.433
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.