STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47835.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_03438 putative glycine/betaine/choline ABC transporter permease component. (245 aa)    
Predicted Functional Partners:
ADO47832.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ctu:Ctu_28000 putative osmoprotectant uptake system substrate-binding protein OsmF.
 
 0.999
ADO47834.1
KEGG: cko:CKO_00665 hypothetical protein; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase.
 0.997
ADO47833.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2729 binding-protein-dependent transport systems inner membrane component.
 
 
 
0.989
ADO47315.1
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: cro:ROD_31311 glycine betaine/L-proline ABC transporter, ATP-binding protein; SMART: AAA ATPase.
  
 0.713
ADO47831.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: enc:ECL_03442 putative periplasmic beta-glucosidase precursor; Belongs to the glycosyl hydrolase 3 family.
  
    0.442
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.