Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO47840.1PFAM: protein of unknown function DUF1456; KEGG: kva:Kvar_1504 protein of unknown function DUF1456. (156 aa)    
Predicted Functional Partners:
ADO47446.1
KEGG: ent:Ent638_3055 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; Belongs to the peptidase S26 family.
   
    0.831
ADO47838.1
Signal transduction histidine kinase, LytS; KEGG: cko:CKO_00668 hypothetical protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: GAF domain protein.
 
   
 0.760
ADO47839.1
Two component transcriptional regulator, LytTR family; KEGG: kpu:KP1_3786 putative two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
 
   
 0.731
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
  
    0.635
ADO49787.1
PFAM: YaeQ family protein; KEGG: kpe:KPK_4530 hypothetical protein.
  
    0.613
ADO47614.1
PFAM: protein of unknown function DUF1323; KEGG: kpu:KP1_4000 putative negative regulator.
   
    0.544
ADO46886.1
PFAM: protein of unknown function DUF45; KEGG: enc:ECL_04487 hypothetical protein.
 
    0.541
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
  
    0.540
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
   
    0.525
ADO49217.1
PFAM: regulatory protein TetR; KEGG: kpe:KPK_3687 transcriptional regulator, TetR family.
   
    0.524
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.