Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO47867.1PFAM: Pili assembly chaperone, N-terminal; KEGG: kpn:KPN_00262 putative fimbriae; chaparone. (230 aa)    
Predicted Functional Partners:
ADO47865.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pau:PA14_37030 usher.
 
 
 0.966
ADO47863.1
PFAM: Fimbrial protein domain-containing protein; KEGG: ypb:YPTS_0171 fimbrial protein.
 
 
 0.947
ADO46505.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eok:G2583_1267 putative outer membrane usher protein.
 
 
 0.858
ADO46908.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sek:SSPA0021 fimbrial usher.
 
 
 0.858
ADO46987.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ecq:ECED1_3711 putative outer membrane usher protein.
 
 
 0.858
ADO47337.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: cko:CKO_04372 hypothetical protein.
 
 
 0.858
ADO48411.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kva:Kvar_2589 fimbrial biogenesis outer membrane usher protein.
 
 
 0.858
ADO48929.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pay:PAU_02408 putative outer membrane protein.
 
 
 0.858
ADO49270.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ctu:Ctu_14010 outer membrane usher protein LpfC.
 
 
 0.858
ADO50656.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: etw:ECSP_4774 fimbrial usher.
 
 
 0.858
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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