Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADO47868.1Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: sec:SC3680 putative transcriptional regulatory protein. (255 aa)    
Predicted Functional Partners:
ADO47869.1
KEGG: enc:ECL_00096 hypothetical protein.
  
  
 0.857
ADO47863.1
PFAM: Fimbrial protein domain-containing protein; KEGG: ypb:YPTS_0171 fimbrial protein.
 
     0.700
ADO47864.1
PFAM: Pili assembly chaperone, N-terminal; KEGG: ypb:YPTS_0170 pili assembly chaperone, N-terminal.
 
    0.681
ADO47867.1
PFAM: Pili assembly chaperone, N-terminal; KEGG: kpn:KPN_00262 putative fimbriae; chaparone.
 
    0.677
ADO47865.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pau:PA14_37030 usher.
 
     0.666
hspQ
Hemimethylated DNA binding protein; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family.
  
     0.654
ADO46554.1
PFAM: YhhN family protein; KEGG: enc:ECL_04830 YhhN family protein.
  
     0.630
ADO50608.1
KEGG: cko:CKO_03128 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
   
 0.605
ADO47866.1
PFAM: Fimbrial protein domain-containing protein; KEGG: yen:YE0158 hypothetical protein.
       0.601
ADO48902.1
KEGG: cko:CKO_00426 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
   
 0.573
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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