STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47871.1KEGG: dze:Dd1591_2664 HicB family protein. (119 aa)    
Predicted Functional Partners:
ADO47870.1
Hypothetical protein; Manually curated; KEGG: xne:XNC1_2390 hypothetical protein.
 
   
 0.959
ADO47854.1
KEGG: ebi:EbC_44610 conserved uncharacterized protein.
  
     0.512
ADO47868.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: sec:SC3680 putative transcriptional regulatory protein.
       0.496
ADO47869.1
KEGG: enc:ECL_00096 hypothetical protein.
       0.496
ADO47863.1
PFAM: Fimbrial protein domain-containing protein; KEGG: ypb:YPTS_0171 fimbrial protein.
 
     0.479
ADO47396.1
Hypothetical protein; KEGG: pam:PANA_3406 H.
  
     0.461
ADO46314.1
Integral membrane sensor signal transduction histidine kinase; KEGG: enc:ECL_00037 sensory histidine kinase UhpB; PFAM: MASE1 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.459
ADO50555.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: enc:ECL_04452 TPS family two-partner secretion family member CdiB.
  
     0.451
ADO46318.1
Transcriptional regulator, XRE family; KEGG: set:SEN3600 putative DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.407
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.