Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADO47962.1PFAM: SpoVT/AbrB domain-containing protein; KEGG: ses:SARI_04523 hypothetical protein. (85 aa)    
Predicted Functional Partners:
ADO47963.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
 
 0.998
ADO47753.1
PFAM: helix-turn-helix protein RpiR; KEGG: pat:Patl_4164 RpiR family transcriptional regulator.
  
     0.530
ADO49197.1
KEGG: plu:plu2099 hypothetical protein.
 
   
 0.473
ADO47961.1
KEGG: cro:ROD_31931 hypothetical protein.
       0.410
ADO47338.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_04373 hypothetical protein.
  
     0.408
ADO47333.1
Hpt sensor hybrid histidine kinase; KEGG: cko:CKO_04368 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3.
  
     0.403
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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