Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO47989.1TIGRFAM: methylaspartate ammonia-lyase; KEGG: cko:CKO_02419 hypothetical protein; PFAM: methylaspartate ammonia-lyase. (413 aa)    
Predicted Functional Partners:
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
 0.996
glmS
Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
  0.994
ADO47988.1
KEGG: cko:CKO_02420 hypothetical protein.
 
     0.959
ADO47987.1
KEGG: cko:CKO_02421 hypothetical protein.
 
     0.953
ADO47991.1
KEGG: cko:CKO_02417 hypothetical protein.
 
     0.945
ADO47986.1
PFAM: sodium:dicarboxylate symporter; KEGG: cko:CKO_02422 hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.553
ADO47984.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.523
ADO47062.1
TIGRFAM: citrate lyase, beta subunit; KEGG: enc:ECL_04296 citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.421
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.418
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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