STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmEMethylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (481 aa)    
Predicted Functional Partners:
glmS
Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  0.998
ADO47989.1
TIGRFAM: methylaspartate ammonia-lyase; KEGG: cko:CKO_02419 hypothetical protein; PFAM: methylaspartate ammonia-lyase.
 
  
 0.995
ADO47988.1
KEGG: cko:CKO_02420 hypothetical protein.
 
     0.951
ADO47987.1
KEGG: cko:CKO_02421 hypothetical protein.
 
     0.945
ADO47991.1
KEGG: cko:CKO_02417 hypothetical protein.
 
     0.942
glsA
TIGRFAM: Glutaminase, core; KEGG: cps:CPS_4729 glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family.
    
 0.885
glsA-2
TIGRFAM: Glutaminase, core; KEGG: kpn:KPN_01636 glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family.
     
 0.821
ADO46763.1
KEGG: kpu:KP1_4936 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
    
  0.816
ADO46762.1
KEGG: spq:SPAB_04154 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
  0.800
ADO48531.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ses:SARI_01144 hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.800
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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