Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48041.1KEGG: eck:EC55989_1643 putative lipoprotein/autotransporter domain-containing protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia. (1468 aa)    
Predicted Functional Partners:
ADO48137.1
PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein.
  
     0.700
ADO47338.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_04373 hypothetical protein.
  
    0.646
ADO48104.1
PFAM: C-5 cytosine-specific DNA methylase; KEGG: kpn:KPN_01395 putative site-specific DNA methylase.
  
     0.588
ADO47753.1
PFAM: helix-turn-helix protein RpiR; KEGG: pat:Patl_4164 RpiR family transcriptional regulator.
  
     0.575
ADO47335.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_04370 hypothetical protein.
  
    0.571
ADO47868.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: sec:SC3680 putative transcriptional regulatory protein.
  
   
 0.568
ADO47337.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: cko:CKO_04372 hypothetical protein.
  
    0.531
ADO48202.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ses:SARI_01069 hypothetical protein.
  
     0.525
ADO47333.1
Hpt sensor hybrid histidine kinase; KEGG: cko:CKO_04368 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3.
  
   
 0.515
ADO46431.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: efe:EFER_2778 putative regulatory protein.
  
     0.498
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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