Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO48096.1Phage protein; KEGG: seg:SG1192 predicted phage protein. (277 aa)    
Predicted Functional Partners:
ADO48097.1
KEGG: enc:ECL_01666 DNA replication protein DnaC.
 
    0.889
ADO48104.1
PFAM: C-5 cytosine-specific DNA methylase; KEGG: kpn:KPN_01395 putative site-specific DNA methylase.
  
    0.732
ADO48103.1
KEGG: kpn:KPN_01394 hypothetical protein.
       0.729
ADO48099.1
PFAM: protein of unknown function DUF977; KEGG: ent:Ent638_2259 hypothetical protein.
       0.722
ADO48101.1
KEGG: spq:SPAB_00985 hypothetical protein.
       0.717
ADO48098.1
KEGG: ent:Ent638_2260 hypothetical protein.
       0.714
ADO48100.1
KEGG: kva:Kvar_2055 hypothetical protein.
       0.714
ADO48102.1
KEGG: sed:SeD_A2298 hypothetical protein.
       0.714
ADO50011.1
SMART: AAA ATPase; KEGG: sec:SC4395 DNA replication protein DnaC.
 
    0.699
ADO48095.1
KEGG: kpe:KPK_3397 hypothetical protein.
       0.612
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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