STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48101.1KEGG: spq:SPAB_00985 hypothetical protein. (217 aa)    
Predicted Functional Partners:
ADO48104.1
PFAM: C-5 cytosine-specific DNA methylase; KEGG: kpn:KPN_01395 putative site-specific DNA methylase.
 
     0.816
ADO48103.1
KEGG: kpn:KPN_01394 hypothetical protein.
  
    0.811
ADO48100.1
KEGG: kva:Kvar_2055 hypothetical protein.
       0.779
ADO48098.1
KEGG: ent:Ent638_2260 hypothetical protein.
       0.773
ADO48099.1
PFAM: protein of unknown function DUF977; KEGG: ent:Ent638_2259 hypothetical protein.
       0.773
ADO48102.1
KEGG: sed:SeD_A2298 hypothetical protein.
       0.773
ADO48097.1
KEGG: enc:ECL_01666 DNA replication protein DnaC.
       0.724
ADO48096.1
Phage protein; KEGG: seg:SG1192 predicted phage protein.
       0.719
ADO48095.1
KEGG: kpe:KPK_3397 hypothetical protein.
       0.559
ADO48094.1
Manually curated; PFAM: helix-turn-helix domain protein; KEGG: sty:STY2065 putative Cro repressor; SMART: helix-turn-helix domain protein.
       0.552
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.