STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48111.1PFAM: antitermination Q family protein; KEGG: eum:ECUMN_0878 antitermination protein from phage origin. (115 aa)    
Predicted Functional Partners:
ADO48109.1
PFAM: endodeoxyribonuclease RusA; KEGG: pmr:PMI0486 phage Holliday junction resolvase.
       0.777
ADO48110.1
KEGG: kpe:KPK_3381 hypothetical protein.
       0.771
ADO48108.1
KEGG: kva:Kvar_2087 hypothetical protein.
       0.757
ADO48106.1
PFAM: DinI family protein; KEGG: ent:Ent638_2256 DinI family protein.
       0.483
ADO48107.1
Hypothetical protein; Manually curated; KEGG: kpe:KPK_3384 hypothetical protein.
       0.483
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.