STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48117.1KEGG: ecw:EcE24377A_2232 hypothetical protein. (161 aa)    
Predicted Functional Partners:
ADO48115.1
KEGG: kva:Kvar_2091 hypothetical protein.
       0.774
ADO48118.1
KEGG: ent:Ent638_0796 hypothetical protein.
       0.773
ADO48116.1
PFAM: protein of unknown function DUF754; KEGG: kpn:KPN_01404 hypothetical protein.
       0.758
ADO49771.1
Manually curated; PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; KEGG: kpn:KPN_00226 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding LysM.
     
 0.533
ADO49735.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cko:CKO_02961 hypothetical protein.
  
     0.520
ADO48114.1
PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: eoi:ECO111_p4-10 probable colicin immunity protein.
  
    0.470
ADO49005.1
KEGG: bmt:BSUIS_B0425 hypothetical protein.
  
     0.441
ADO48113.1
KEGG: ddc:Dd586_1316 hypothetical protein.
       0.416
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.