Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO48174.1PFAM: protein of unknown function DUF991; KEGG: enc:ECL_01425 hypothetical protein. (191 aa)    
Predicted Functional Partners:
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.769
ADO50196.1
PFAM: Opacity-associated protein A domain protein; KEGG: kpu:KP1_0473 putative cell envelope opacity-associated protein A.
  
    0.766
ADO49987.1
PFAM: Virulence factor, haemolysin regulator; KEGG: cro:ROD_49101 hypothetical protein.
  
     0.749
bamC
Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.740
uspB
PFAM: Universal stress protein B; KEGG: kva:Kvar_0242 universal stress protein B.
  
     0.730
ADO50643.1
PFAM: ATP synthase I chain; KEGG: kva:Kvar_5075 ATP synthase I chain.
  
   
 0.727
ADO50510.1
PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein.
  
     0.725
ADO49210.1
PFAM: Sensory transduction regulator, putative; KEGG: kva:Kvar_3493 sensory transduction regulator, putative.
  
     0.723
ADO50353.1
KEGG: enc:ECL_00308 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G.
  
     0.713
ADO49568.1
PFAM: Primosomal replication priB and priC; KEGG: efe:EFER_2550 primosomal replication protein N''.
  
     0.712
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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