STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48202.1PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ses:SARI_01069 hypothetical protein. (235 aa)    
Predicted Functional Partners:
ADO47586.1
Transcriptional regulator, AraC family; Manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_00349 transcriptional regulator EutR; SMART: Helix-turn-helix, AraC domain.
  
     0.757
ADO49081.1
PFAM: Protein of unknown function DUF2057; KEGG: sew:SeSA_A1140 hypothetical protein; Belongs to the UPF0319 family.
  
   
 0.750
ADO48171.1
PFAM: flagellar FlhE family protein; KEGG: set:SEN1091 flagellar protein FlhE precursor.
  
     0.720
ADO48201.1
KEGG: kpe:KPK_1929 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease.
  
    0.702
ADO47099.1
Mannitol repressor, MtlR; PFAM: Mannitol repressor; KEGG: ses:SARI_04567 putative DNA-binding transcriptional regulator.
  
     0.626
ADO50390.1
Zinc resistance protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.
  
    0.594
ADO48203.1
PFAM: DNA polymerase II beta subunit; KEGG: enc:ECL_01454 DNA polymerase III subunit theta.
       0.588
ADO50608.1
KEGG: cko:CKO_03128 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
     0.588
ADO50286.1
Transcriptional regulator, AraC family; KEGG: ect:ECIAI39_0540 DNA-binding transcriptional activator of porin biosynthesis; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.576
ADO47574.1
Cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: cko:CKO_00336 hypothetical protein; PFAM: cobalamin adenosyltransferase.
  
     0.571
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.