Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48215.1KEGG: ent:Ent638_2403 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A. (427 aa)    
Predicted Functional Partners:
ADO48214.1
PFAM: Mammalian cell entry related domain protein; KEGG: cko:CKO_01139 hypothetical protein.
     0.981
ADO49094.1
PFAM: Mammalian cell entry related domain protein; KEGG: ses:SARI_01945 paraquat-inducible protein B.
 
 
 0.912
rsmF
RNA methylase, NOL1/NOP2/sun family; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.
      0.907
ADO48212.1
PFAM: protein of unknown function DUF1480; KEGG: kva:Kvar_1829 protein of unknown function DUF1480.
  
 
 0.722
ADO49093.1
PFAM: protein of unknown function DUF330; KEGG: kpe:KPK_3587 putative lipoprotein.
 
  
 0.704
ADO48216.1
KEGG: enc:ECL_01469 hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein.
       0.570
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
    0.510
proQ
Fertility inhibition FinO-like protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.
       0.432
ADO48218.1
Carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: kpu:KP1_3473 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
       0.409
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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