STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48220.1PFAM: major facilitator superfamily MFS_1; KEGG: kva:Kvar_1837 major facilitator superfamily MFS_1. (457 aa)    
Predicted Functional Partners:
ADO47310.1
KEGG: enc:ECL_04022 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein.
 
 
 0.537
ADO46304.1
KEGG: kva:Kvar_0026 multidrug/H+ antiporter, major facilitator superfamily (MFS); TIGRFAM: multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1.
  
   
 0.527
ADO48424.1
Drug resistance transporter, Bcr/CflA subfamily; KEGG: see:SNSL254_A1538 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.
  
  
 0.523
ADO48221.1
Transcriptional regulator, IclR family; KEGG: cko:CKO_01146 hypothetical protein; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
       0.508
ADO47883.1
PFAM: major facilitator superfamily MFS_1; KEGG: stt:t2508 putative metabolite transport protein.
  
     0.423
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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