STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48233.1PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: efe:EFER_1260 putative membrane protein fused with conserved domain. (519 aa)    
Predicted Functional Partners:
ADO47006.1
PFAM: protein of unknown function DUF388, OB-fold; KEGG: ent:Ent638_3428 hypothetical protein.
   
  
 0.550
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.523
ADO49221.1
Undecaprenyl-diphosphatase; PFAM: phosphoesterase PA-phosphatase related; KEGG: enc:ECL_02877 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related.
     
 0.511
ADO47509.1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
      
 0.506
ADO48283.1
PFAM: Propeptide PepSY amd peptidase M4; KEGG: dar:Daro_2303 hypothetical protein.
   
    0.468
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.409
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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