STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48247.1PFAM: protein of unknown function DUF709; KEGG: cro:ROD_18371 hypothetical protein. (91 aa)    
Predicted Functional Partners:
ADO48248.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: kva:Kvar_1873 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
    0.775
hflD
PFAM: protein of unknown function DUF489; KEGG: cko:CKO_01839 hypothetical protein.
  
  
 0.744
ADO48249.1
PFAM: protein of unknown function UPF0153; KEGG: cro:ROD_18351 hypothetical protein; Belongs to the UPF0260 family.
 
     0.707
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.705
nfuA
IscR-regulated protein YhgI; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
     0.676
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
    0.648
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
 
     0.647
ADO48245.1
TIGRFAM: septum site-determining protein MinD; KEGG: enc:ECL_01502 cell division inhibitor MinD.
       0.622
ADO48953.1
PFAM: protein of unknown function DUF177; KEGG: ses:SARI_01808 hypothetical protein.
  
     0.599
ADO47196.1
PFAM: Conserved hypothetical protein CHP00730; KEGG: sbo:SBO_2676 hypothetical protein.
  
     0.595
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.