STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48268.1PFAM: protein of unknown function DUF886; KEGG: kva:Kvar_3028 protein of unknown function DUF886. (183 aa)    
Predicted Functional Partners:
ADO49302.1
Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: cko:CKO_02358 hypothetical protein; SMART: regulatory protein GntR HTH.
 
  
 0.813
ADO48273.1
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: kva:Kvar_3023 histidine ammonia-lyase.
 
  
 0.653
ADO50340.1
KEGG: cno:NT01CX_0293 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.581
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.576
ADO48269.1
KEGG: kva:Kvar_3027 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
       0.488
hutI
TIGRFAM: imidazolonepropionase; KEGG: kpu:KP1_1742 imidazolonepropionase; PFAM: amidohydrolase.
 
   
 0.484
ADO48271.1
KEGG: kva:Kvar_3025 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.466
ADO48270.1
KEGG: kva:Kvar_3026 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.462
ADO48272.1
KEGG: kva:Kvar_3024 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.462
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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