Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO48283.1PFAM: Propeptide PepSY amd peptidase M4; KEGG: dar:Daro_2303 hypothetical protein. (96 aa)    
Predicted Functional Partners:
ADO47006.1
PFAM: protein of unknown function DUF388, OB-fold; KEGG: ent:Ent638_3428 hypothetical protein.
  
    0.910
ADO48279.1
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
     
 0.503
ADO48233.1
PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: efe:EFER_1260 putative membrane protein fused with conserved domain.
   
    0.468
ADO50183.1
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: enc:ECL_00615 hypothetical protein.
   
    0.468
ADO48284.1
KEGG: pmr:PMI0625 C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
       0.463
ADO48280.1
TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: dar:Daro_2259 two component heavy metal response transcriptional regulator; SMART: response regulator receiver.
  
  
 0.457
ADO48282.1
KEGG: reu:Reut_A3424 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.428
ADO48281.1
PFAM: acriflavin resistance protein; KEGG: har:HEAR1043 multidrug ABC transporter membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.424
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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